Projects

Fishing 🎣
Spending a lot of my free time outdoors along the water trying to trick fish.
Fishing 🎣
nciraspw
The NCI Ras Initiative’s Ras Pathway 2.0 exposed as a NetworkX object.
nciraspw
tumoroscope-pymc
Tumoroscope, a generative model of spatial transcriptomics clonality, implemented in PyMC.
tumoroscope-pymc
Comparing ML/AI summarizations of papers
Automatically download and parse research articles then summarize them with various ML and AI models.
Comparing ML/AI summarizations of papers
Reading
The books I have read along with my ratings and the rare review.
Reading
Bread (and pizza!)
Just pictures and descriptions of some of the bread and pizza I’ve made.
Flour Water Salt Yeast The Elements of Pizza Tartine Bread Bread Making at Home
Bread (and pizza!)
boston311
Python package for interfacing with Boston 311 API.
Joshua Cook, Ph.D.
Source Documentation PyPI
boston311
Bayesian Data Analysis
The steps I have taken to learn how to conduct Bayesian data analysis.
Bayesian Data Analysis
Counting Coffee
A suite of projects for tracking my coffee consumption.
API SwiftBar plugin Web app API source Web app source
Counting Coffee
Bayesian analysis of the 'Facial Feedback Hypothesis'
My own visualization and statistical analysis of the data from a replication study of this famous phsycology paper.
Bayesian analysis of the 'Facial Feedback Hypothesis'